As a Bioinformatics Pipeline Engineer, you will be responsible for the design, development, and maintenance of bioinformatics pipelines, primarily using Oxford Nanopore reads. You will collaborate with the bioinformatic and wet lab scientists to understand and implement the specific pipeline goals, while applying your software engineering expertise. A primary focus will be ensuring that our pipelines are robust, scalable, and meet high coding standards.
In this job you will:
Requirements
Tech stack:
Snakemake, Nextflow, Python, Conda, Docker / Apptainer / Singularity, AWS (lambda, S3, RDS), Git + Github Actions.
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